This blog posts explains how to train a deep learning lymphoma sub-type classifier in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 7: Lymphoma Sub-Type Classification →
This blog posts explains how to train a deep learning mitosis detector in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 5: Mitosis Detection →
This blog posts explains how to train a deep learning Invasive Ductal Carcinoma (IDC) classifier in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 6: Invasive Ductal Carcinoma (IDC) Segmentation →
This blog posts explains how to train a deep learning tubule segmentation classifier in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 3: Tubule Segmentation →
Typically, you’ll want to use a validation set to determine an optimal threshold as it is often not .5 (which is equivalent to argmax). Subsequently, use this threshold on the the “_prob” image to generate a binary image.This blog posts explains how to train a deep learning lymphocyte detector in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 4: Lymphocyte Detection →
This blog posts explains how to train a deep learning epithelium segmentation classifier in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 2: Epithelium Segmentation →
This blog posts explains how to train a deep learning nuclear segmentation classifier in accordance with our paper “Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases”.
Continue reading Use Case 1: Nuclei Segmentation →
Tidbits from along the way